Coulter Epics Elite

Aber Instruments Microcyte

Partec

Sample preparation notes

How to use the Skatron Argus

How to use the Coulter Epics Elite

Flow Cytometers at Aberystwyth

We have three flow cytometers at Aberystwyth, a Coulter Epics Elite, an Aber Instruments Microcyte and a shiny new Partec PAS III.

We used to have a Skatron Argus but this has been retired to Cardiff. Information on this flow cytometer is still available here.

There is more information on the features of these machines below. First of all though there follows a brief description of what is meant by the term "flow cytometer", and what it is that they do.

Introduction

In a typical microbial flow cytometer individual particles pass through an illumination zone, typically at a rate of some 1000 cells.s-1 (although much higher rates are possible in specialised instruments, and appropriate detectors, gated electronically, measure the magnitude of a pulse representing the extent of light scattered. The magnitudes of these pulses are sorted electronically into "bins" or "channels", permitting the display of histograms of the number of cells possessing a certain quantitative property vs channel number. Although many of the applications of flow cytometry, such as microbial discrimination, require only a qualitative output, the flow cytometric approach also offers quantitative information.

The angular-dependence of scattered light provides information on the nature of the scattering particles but more importantly, appropriate fluorophores may be added to the cell suspension. These may be stains which bind to (or react with) particular molecules such as DNA, RNA or protein, fluorogenic substrates which reveal distributions in enzymatic activity, indicators which change their property as a function of pHinor which are taken up in response to membrane energisation, or, increasingly, antibodies or oligonucleotides tagged with a fluorescent probe. 2- or 3-variable histograms or contour plots of, for example, light scattering vs fluorescence from a DNA stain (vs fluorescence from a protein stain) etc. may also be generated, and thus an impression gained of the distribution of a variety of properties of interest amongst the cells in the population as a whole.

Fluorescence of yeast stained with FITC.

The Skatron Argus 100 Flow Cytometer

The Skatron is somewhat unusual amongst flow cytometers in that it uses a mercury arc-lamp rather than a laser as its light source, in addition it differs from conventional flow cytometers in that it was designed primarily for the study of microrganisms.

Given that both the cell volume and the DNA content of bacteria is some 1000-fold less than that of higher eukaryotic cells, other flow cytometers have until recently proved unsuitable for the study of unstained microorganisms. The Skatron has a specially designed open flow chamber resulting in a high signal-to-noise ratio and is therefore ideal for detecting light scattered by microorganisms. Some notes on using the Skatron are provided here.


Coulter Epics Elite

Like most flow cytometers the Elite uses laser light, infact our model has 4 lasers thus giving us a range of excitation possibilities, allowing a wide range of fluorochromes to be studied. The Elite was designed primarily for use with mamalian cells, but its sensitivity is just about sufficient for the study of light scattering by bacteria, and where they have been stained with fluorescent compounds they can be detected and analysed with ease.

The Elite has the advantage over the Skatron that it is able to sort the cells of interest based on the light-scattering and/or fluorescence characteristics measured. Typically cells are sorted onto a microscope slide for further analysis or live cells maybe sorted into test tubes or into wells of a microtiter plate to be grown up for further study.


Aber Instruments Microcyte

The Microcyte was launched at the ISAC 1996 conference in Rimini. It exploits a red (635 nm) laser diode as the light source and has an internal battery pack allowing it to be used as a fully portable flow cytometer. The instrument has been designed primarily for the analysis of microorganisms and can detect and provide accurate absolute counts of (i.e. without an internal standard) particles as small as 0.4 micrometres. For more information on this flow cytometer you can visit my Microcyte pages, Aber Instruments or Optoflow

Partec PAS III

Our latest acquisition (March 2000) is a Partec PAS III particle analysing system. The Partec is a modular flow cytometer, allowing a more complex system to be purchased and commissioned over time. Our system has a mercury arc lamp for UV excitation, a 488 nm argon laser and a 633 nm HeNe laser. Like the Microcyte the Partec can perform absolute counts but it is more flexible in that it has 6 optical parameters. The instrument has a built in pc and the acquisition software runs under Microsoft Windows 98. The instrument is capable of analysing more than 10000 cells/sec. For more information see the
Partec website.

Last updated August 2000.

Flow Cytometry Home Page

Author: Hazel Davey hlr@aber.ac.uk